Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917721.1_cds_XP_016467254.1_60014
CDS Infomation

[gene=LOC107789890] [db_xref=GeneID:107789890] [protein=pyruvate decarboxylase 1-like] [protein_id=XP_016467254.1] [location=join(151527..152045,152520..152683,153349..153999,154102..154219,154302..154490,154568..154738)] [gbkey=CDS]
Sequence

ATGGATTTCAAGGTCAGTGCAATCGACACGTGTAAACCTTTAAACAACGAAATATCCAAC
TTACCAGCCCAAAACGCCGTTACAATCCAAACTCCCACCGTTCCGTTCAATTCCCCATAC
TCAACTCTAGGCCGTCACCTCGCACGCCGTTTACTCCAAATCGGCGTCACCGACGTTTTC
TCCGTTCCCGGCGACTTCAACTTAACACTTTTAGACCACCTCGTATCTGAACCTGAACTT
AACCTCGTAGGTTGTTGTAATGAACTTAATGCTGGTTATGCCGCTGACGGTTATGCTAGA
GCACGTGGTGTGGGTGCGTGTGTTGTTACGTTCACTGTAGGGGGATTAAGTGTTTTGAAT
GCTATAGCGGGTGCTTATAGTGAGAATCTACCGTTGATATGTATTGTTGGGGGACCTAAT
TCGAATGATTATGGAACCAACAGGATTTTACATCATACTATTGGGTTGCAGGATTTTAGT
CAGGAGCTCCGTTGCTTTCAAACTGTTACTTGCTACCAGGCTGTGGTGAATAATTTGGAG
GATGCACATGAACTGATCGACACTGCAATATCTACAGCTTTGAAAGAGAGTAAGCCGGTG
TACATAAGCATAGGCTGTAATCTGCCGGGGATTCCACACCCTACTTTCAGTCGTGAACCA
GTTCCATTTGCCTTCTCTCCCAGACTGAGTAATATGATGGGTTTGGAAGCAGCAGTGGAG
GCAGCGACTGAGTTCTTGAATAAAGCAGTAAAGCCAGTACTTGTTGGAGGGCCAAAAATG
CGAGTTGCAAAGGCATCTGATGCTTTTGTTGAGTTGTCTGATGCCTGTGGTTATGCTGTC
GCAGTGATGCCATCCGCTAAAGGGTTGTTTCCCGAACACCATTCACATTTCATTGGGACT
TACTGGGGTGCAGTGAGCACGGCATTCTGTGCTGAAATTGTGGAATCTGCTGATGCATAC
TTGTTTGCTGGACCTATTTTTAATGACTATAGCTCTGTTGGTTATTCTCTGCTTCTCAAG
AAAGAGAAAGCGATCATTGTCCAGCCTGATCGTGTGACTATTGGGAATGGACCAGCGTTT
GGTTGTGTTCTGATGAGGGATTTCCTTGCTGCATTAGCAAAGAGATTAAAGCATAATCCG
ACTGCTTATGAGAATTACCATAGGATTTATATTCCTGAGGGACATCCTCTTAAATGTGAG
CCTAAGGAGGCATTAAGGGTTAATGTTCTATTTCAACACATTCAGAATATGTTGTCTGGC
GACAGTGCTGTGATTGCTGAGACGGGGGACTCATGGTTTAATTGCCAGAAGCTGAAATTG
CCACAAGGATGTGGTTATGAGTTCCAAATGCAGTATGGATCCATCGGTTGGTCTGTCGGT
GCAACTCTTGGTTACGCACAAGCTGCACCTGAAAAGCGGGTGATTGCATGCATCGGTGAT
GGTAGCTTTCAGGTGACTGCTCAGGATATTTCAACGATGCTGAGGTGCGGACAAAGGACC
ATTATCTTCTTGATAAACAATGGTGGTTATACAATTGAAGTTGAGATCCATGATGGACCT
TACAATGTGATCAAGAATTGGAATTACACCGGATTAGTCGATGCAATCCATAATGGAGAA
GGAAAATGTTGGACAACCAAGGTTTATTGTGAAGAGGAGCTGGTGGAAGCAATTGAAACA
GCAAATGGAGCCAAGAAAGACTGCCTATGCTTCATTGAAGTGATTGTCCATAAAGATGAC
ACTAGCAAAGAGCTGCTTGAATGGGGTTCAAGGGTTTCAGCAGCTAATAGTCGTCCACCA
AACCCACAGTAA

Peptide Sequence

PEP ID

XP_016467254.1
PEP Infomation

PREDICTED: pyruvate decarboxylase 1-like [Nicotiana tabacum]
Sequence

MDFKVSAIDTCKPLNNEISNLPAQNAVTIQTPTVPFNSPYSTLGRHLARRLLQIGVTDVF
SVPGDFNLTLLDHLVSEPELNLVGCCNELNAGYAADGYARARGVGACVVTFTVGGLSVLN
AIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLQDFSQELRCFQTVTCYQAVVNNLE
DAHELIDTAISTALKESKPVYISIGCNLPGIPHPTFSREPVPFAFSPRLSNMMGLEAAVE
AATEFLNKAVKPVLVGGPKMRVAKASDAFVELSDACGYAVAVMPSAKGLFPEHHSHFIGT
YWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVTIGNGPAF
GCVLMRDFLAALAKRLKHNPTAYENYHRIYIPEGHPLKCEPKEALRVNVLFQHIQNMLSG
DSAVIAETGDSWFNCQKLKLPQGCGYEFQMQYGSIGWSVGATLGYAQAAPEKRVIACIGD
GSFQVTAQDISTMLRCGQRTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGE
GKCWTTKVYCEEELVEAIETANGAKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPP
NPQ

Transcript Sequence

Gene sequence data has not been registered.